Publications
Microarray publications by Arrayjet customers
Arrayjet is pleased to share a selection of publications written by users of our microarray printers and customers who outsource to Arrayjet Advance™.
We have a worldwide customer base that is happy to act as a reference where Arrayjet can arrange an introduction to our microarray technology at instrument demo sites. Contact us to arrange a visit.
2021
Max Planck Institute for Marine Biology
Diatom fucan polysaccharide precipitates carbon during algal blooms
S. Vidal-Melgosa, A. Sichert, T. B. Francis, D. Bartosik, J. Niggemann, A. Wichels, W. G. T. Willats, B. M. Fuchs, H. Teeling, D. Becher, T. Schweder, R. Amann, and J. Hehemann
Nature Communications
Third Military Medical University and Chongqing Key Laboratory of Ageing and Brain Diseases
Association of naturally occurring antibodies to β-amyloid with cognitive decline and cerebral amyloidosis in Alzheimer’s disease
Y. Liu, J. Wang, Q. Li, C. J. Fowler, F. Zeng, J. Deng, Z. Xu, H. Zhou, J. D. Doecke, V. L. Villemagne, Y. Y. Lim, C. L. Masters, and Y. Wang
Science Advances
University of Bern
Component‐resolved microarray analysis of IgE sensitization profiles to Culicoides recombinant allergens in horses with insect bite hypersensitivity
El. N. Novotny, S. J. White, A. D. Wilson, S. B. Stefánsdóttir, E. Tijhaar, S. Jonsdóttir, R. Frey, D. Reiche, H. Rose, C. Rhyner, G. Schüpbach‐Regula, S. Torsteinsdóttir, M. Alcocer, and E. Marti
Allergy
University of Brussels
Amino acid side chain contribution to protein FTIR spectra: impact on secondary structure evaluation
J. De Meutter and E. Goormaghtigh
European Biophysics Journal
2020
Abmart
An array of 60,000 antibodies for proteome-scale antibody generation and target discovery
Z. Wang, Y. Li, B. Hou, M. I. Pronobis, M. Wang, Y. Wang, G. Cheng, W. Weng, Y. Wang, Y. Tang, X. Xu, R. Pan, F. Lin, N. Wang, Z. Chen, S. Wang, L. Ma, Y. Li, D. Huang, L. Jiang, Z. Wang, W. Zeng, Y. Zhang, X. Du, Y. Lin, Z. Li, Q. Xia, J. Geng, H. Dai, Y. Yu, X. Zhao, Z. Yuan, J. Yan, Q. Nie, X. Zhang, K. Wang, F. Chen, Q. Zhang, Y. Zhu, S. Zheng, K. D. Poss, S. Tao, and X. Meng
Science Advance
Agriculture and Agri-Food Canada
Combinatorial glycomic analyses to Direct CAZyme Discovery for the tailored degradation of canola meal non-starch dietary polysaccharides
K. E. Low, X. Xing, P. E. Moote, G. D. Inglis, S. Venketachalam, M. G. Hahn, M. L. King, C. Y. Tétard-Jones, D. R. Jones, W. G. T. Willats, B. A. Slominski, and D. W. Abbott
Microorganisms
Chinese Academy of Agricultural Sciences and Abmart
Application of an antibody chip for screening differentially expressed proteins during peach ripening and identification of a metabolon in the SAM cycle to generate a peach ethylene biosynthesis model
W. Zeng, L. Niu, Z. Wang, X. Wang, Y. Wang, L. Pan, Z. Lu, G. Cui, W. Weng, M. Wang, X. Meng, and Z. Wang
Horticulture Research
GSK Vaccines
Immunological fingerprint of 4CMenB recombinant antigens via protein microarray reveals key immunosignatures correlating with bactericidal activity
E. Bartolini, E. Borgogni, M. Bruttini, A. Muzzi, M. Giuliani, S. Iozzi, R. Petracca, M. Martinelli, S. Bonacci, S. Marchi, C. Brettoni, C. Donati, G. Torricelli, S. Guidotti, M. Domina, C. Beninati, G. Teti, F. Felici, R. Rappuoli, F. Castellino, G. Del Giudice, V. Masignani, M. Pizza, and D. Maione
Nature Communications
Jiangnan University
Conjugation of Synthetic Trisaccharide of Staphylococcus aureus Type 8 Capsular Polysaccharide Elicits Antibodies Recognizing Intact Bacterium
M. Zhao, C. Qin, L. Li, H. Xie, B. Ma, Z. Zhou, J. Yin, and J. Hu
Frontiers in Chemistry
KTH Royal Institute of Technology
Exploring autoantibody signatures in brain tissue from patients with severe mental illness
D. Just, A. Manberg, N. Mitsios, C. A. Stockmeier, G. Rajkowska, M. Uhlén, J. Mulder, L. Feuk, J. L. Cunningham, P. Nilsson, and Eva Lindholm Carlström
Translational Psychiatry
National Institute for Public Health and the Environment (RIVM)
Specific memory B cell response in humans upon infection with highly pathogenic H7N7 avian influenza virus
B. Westerhuis, H. ten Hulscher, R. Jacobi, J. van Beek, M. Koopmans, G. Rimmelzwaan, A. Meijer, and R. van Binnendijk
Scientific Reports
Norwegian University of Life Sciences
Microbiota-directed fibre activates both targeted and secondary metabolic shifts in the distal gut
L. Michalak, J. Christian Gaby, L. Lagos, S. Leanti La Rosa, T. R. Hvidsten, C. Tétard-Jones, W. G. T. Willats, N. Terrapon, V. Lombard, B. Henrissat, J. Dröge, M. Øverlie Arntzen, L. H. Hagen, M. Øverland, P. B. Pope, and Bjørge Westereng
Nature Communications
Shanghai Jiao Tong University
Longitudinal serum autoantibody repertoire profiling identifies surgery-associated biomarkers in lung adenocarcinoma
Y. Li, C. Li, S. Guo, W. Guo, H. Jiang, H. Li, and S. Tao
EBioMedicine
Stellenbosch University
Overexpression of VviPGIP1 and NtCAD14 in Tobacco Screened Using Glycan Microarrays Reveals Cell Wall Reorganisation in the Absence of Fungal Infection
F. Weiller, L. Gerber, J. Trygg, J. U. Fangel, W. G. T. Willats, A. Driouich, M. A. Vivier, and J. P. Moore
Vaccines
Uniformed Services University of the Health Sciences
Functional role of vitronectin in breast cancer
A. Bera, M. Subramanian, J. Karaian, M. Eklund, S. Radhakrishnan, N. Gana, S. Rothwell, H. Pollard, H. Hu, C. D. Shriver, and M. Srivastava
PLoS One
University of Copenhagen
Non‐GMO potato lines, synthesizing increased amylose and resistant starch, are mainly deficient in isoamylase debranching enzyme
A. Blennow, K. Skryhan, V. Tanackovic, S. L. Krunic, S. S. Shaik, M. S. Andersen, H. Kirk, and K. L. Nielsen
Plant Biotechnology Journal
University of Malaga
Exploring the use of fruit callus culture as a model system to study color development and cell wall
remodeling during strawberry fruit ripening
P. Ric-Varas, M. Barceló, J. A. Rivera, S. Cerezo, A. J. Matas, J. Schückel, J. P. Knox, S. Posé, F. Pliego-Alfaro, and J. A. Mercado
Plants
University of Nottingham
Antigen array for serological diagnosis and novel allergen identification in severe equine asthma
S. J. White, M. Moore-Colyer, E. Marti, D. Hannant, V. Gerber, L. Coüetil, E. A. Richard & M. Alcocer
Nature
University of Technology, Sydney
The novel E. coli cell division protein, YtfB, plays a role in eukaryotic cell adhesion
A. L. Bottomley, E. Peterson, G. Iosifidis, A. Mei Hui Yong, L. E. Hartley-Tassell, S. Ansari, C. McKenzie, C. Burke, I. G. Duggin, K. A. Kline, and E. J. Harry
Scientific Reports
2019
Austrian Institute of Technology
High similarity of IgG antibody profiles in blood and saliva opens opportunities for saliva based serology
P. Hettegger, J. Huber, K. Paßecker, R. Soldo, U. Kegler, C. Nohammer, A. Weinhausel
PLoS One
CDI Laboratories and John Hopkins School of Medicine
Development and application of a high-content virion display human GPCR array
G. Syu, S. Wang, G. Ma, S. Liu, D. Pearce, A. Prakash, B. Henson, L. Weng, D. Ghosh, P. Ramos, D. Eichinger, I. Pino, X. Dong, J. Xiao, S. Wang, N. Tao, K. Sik Kim, P. J. Desai, and H. Zhu
Nature Communications
Ghent University
Polyploidy affects plant growth and alters cell wall composition
S. Corneillie, N. De Storme, R. Van Acker, J. U. Fangel, M. De Bruyne, R. De Rycke, D. Geelen, W. G. T. Willats, B. Vanholme, and W. Boerjana
Plant Physiology
Griffith University
Lectin Activity of the TcdA and TcdB Toxins of Clostridium difficile
L. E. Hartley-Tassell, M. M. Awad, K. L. Seib, M. Scarselli, S. Savino, J. Tiralongo, D. Lyras, C. J. Day, and M. P. Jennings
Infection and Immunity
GSK
Retrospective identification of a broad IgG repertoire differentiating patients with S. aureus skin and soft tissue infections from controls
F. Rigat, E. Bartolini, M. Dalsass, N. Kumar, S. Marchi, P. Speziale, D. Maione, L. Chen, M. R. Romano, M. Alegre, F. Bagnoli, R. S. Daum, and M. Z. David
Frontiers in Immunology
London School of Hygiene and Tropical Medicine
Antibody responses to antigenic targets of recent exposure are associated with low-density parasitemia in controlled human Plasmodium falciparum infections
L. L. van den Hoogen, J. Walk, T. Oulton, I. J. Reuling, L. Reiling, J. G. Beeson, R. L. Coppel, S. K. Singh, S. J. Draper, T. Bousema, C. Drakeley, R. Sauerwein, and K. K. A. Tetteh
Frontiers in Immunology
National Center for Protein Sciences
In-depth serum proteomics reveals biomarkers of psoriasis severity and response to traditional Chinese medicine
M. Xu, J. Deng, K. Xu, T. Zhu, L. Han, Y. Yan, D. Yao, H. Deng, D. Wang, Y. Sun, C. Chang, X. Zhang, J. Dai, L. Yue, Q. Zhang, X. Cai, Y. Zhu, H. Duan, Y. Liu, D. Li, Y. Zhu, T. R. D. J. Radstake, D. M. W. Balak, D. Xu, T. Guo, C. Lu, and X. Yu
Theranostics
Ohio State University
Interspecies cross-feeding orchestrates carbon degradation in the rumen ecosystem
L. M. Solden, A. E. Naas, S. Roux, R. A. Daly, W. B. Collins, C. D. Nicora, S. O. Purvine, D. W. Hoyt, J. Schückel, B. Jørgensen, William Willats, D. E. Spalinger, J. L. Firkins, M. S. Lipton, M. B. Sullivan , P. B. Pope, and
K. C. Wrighton
Nature Microbiology
University of Copenhagen
Detection of seasonal variation in Aloe polysaccharides using carbohydrate detecting microarrays
L. I. Ahl, N. Al-Husseini, S. Al-Helle, D. Staerk, O. M. Grace, W. G. T. Willats, J. Mravec, B. Jørgensen, and N. Rønsted
Frontiers in Plant Science
Dynamics of intracellular mannan and cell wall folding in the drought responses of succulent Aloe speciesL. I. Ahl, J. Mravec, B. Jørgensen, P. J. Rudall, N. Rønsted, and O. M. Grace
Plant, Cell and Environment
University of Manchester
Immunogenicity profling of protein antigens from capsular group B Neisseria meningitidis
A. M.Awanye, C. M. Chang, J. X. Wheeler, H. Chan, L. Marsay, C. Dold, C. S. Rollier, L. E. Bird, J. E. Nettleship,
R. J. Owens, A. J. Pollard, and J. P. Derrick
Nature Scientific Reports
University of Nottingham
Antigen array for serological diagnosis and novel allergen detection identification in severe equine asthma
S. J. White, M. Moore-Colyer, E. Marti, D. Hannant, V. Gerber, L. Coüetil, E. A. Richard, and M. Alcocer
Nature Scientific Reports
Development of a comprehensive protein microarray for immunoglobulin E profiling in horses with severe asthma
S. White, M. Moore‐Colyer, E. Marti, L. Coüetil, D. Hannant, E. A. Richard, and M. Alcocer
Journal of Veterinary Medicine
Microarray feature selection and dynamic selection of classifiers for early detection of insect bite hypersensitivity in horses
A. Maciel-Guerra, G. P. Figueredo, F. J. Von Zuben, E. Marti, J. Twycross, and M. J. C. Alcocer
Conference: 2019 IEEE Congress on Evolutionary Computation
University of Torino
Understanding changes in tomato cell walls in roots and fruits: The contribution of arbuscular mycorrhizal colonization
M. Chialva, J. U. Fangel, M. Novero, I. Zouari, A. Salvioli di Fossalunga, W. G. T. Willats, P. Bonfante, and R. Balestrini
International Journal of Molecule Sciences
USAMRID
Targeting protein–protein interactions of tyrosine phosphatases with microarrayed fragment libraries displayed on phosphopeptide substrate scaffolds
M. Hogan, M. Bahta, K. Tsuji, T. X. Nguyen, S. Cherry, G. T. Lountos, J. E. Tropea, B. M. Zhao, X. Z. Zhao, D. S. Waugh, T. R. Burke, Jr., and R. G. Ulrich
ACS Combinatorial Science
2018
Australian Centre for Blood Sciences
A function-blocking PAR4 antibody is markedly antithrombotic in the face of a hyperreactive PAR4 variant
S. L. French, C. Thalman, P. F Bray, L. E. Macdonald, A. J. Murphy, M. W. Sleeman, and J. R. Hamilton
Blood Sciences
Cancer Research Centre - Consejo Superior de Investigaciones Científicas (CSIC)
A systematic analysis workflow for high-density customized protein microarrays in biomarker screening
R. García-Valiente, J. Fernández-García, J. Carabias-Sánchez, A. Landeira-Viñuela, R. Góngora, M. Gonzalez-Gonzalez, and M. Fuentes
Functional Proteomics
Differential recognition of Haemophilus influenzae whole bacterial cells and isolated lipooligosaccharides by galactose-specific lectins
I. Kalograiaki, B. Euba, M. del Carmen Fernandez-Alonso, D. Proverbio, J. W. St. Geme III, T. Aastrup, J. Garmendia, F. J. Canada, and D. Solis
Scientific Reports
Direct evaluation of live uropathogenic Escherichia coli adhesion and efficiency of anti-adhesive compounds using a simple microarray approach
I. Kalograiaki, M. Abellán-Flos, L. Á. Fernández, M. Menéndez, S. P. Vincent, and D. Solís
Analytical Chemistry
Fundación Instituto de Inmunología de Colombia
Self-assembling functional programmable protein array for studying protein–protein interactions in malaria parasites
G. Arévalo-Pinzón, M. González-González, C. F. Suárez, H. Curtidor, J. Carabias-Sánchez, A. Muro, J. LaBaer, M. A. Patarroyo, and M. Fuentes
Malaria Journal
GSK
Human protective response induced by meningococcus B vaccine is mediated by the synergy of multiple bactericidal epitopes
M. Giuliani, E. Bartolini, B. Galli, L. Santini, P. Lo Surdo, F. Buricchi, M. Bruttini, B. Benucci, N. Pacchiani, L. Alleri, D. Donnarumma, W. Pansegrau, I. Peschiera, I. Ferlenghi, R. Cozzi, N. Norais, M. M. Giuliani, D. Maione, M. Pizza, R. Rappuoli, O. Finco, and V. Masignani
Nature Scientific Reports
Structures of NHBA elucidate a broadly conserved epitope identified by a vaccine-induced antibody
M. Maritan, D. Veggi, R. Cozzi, L. D. Iacono, E. Bartolini, P. L. Surdo, G. Maruggi, G. Spraggon, M. J. Bottomley, E. Malito
PLoS One
KEMRI Wellcome Trust
KILchip v1.0: A Novel Plasmodium falciparum Merozoite Protein Microarray to Facilitate Malaria Vaccine Candidate Prioritization
G. Kamuyu, J. Tuju, R. Kimathi, K. Mwai, J. Mburu, N. Kibinge, M. Chong Kwan, S. Hawkings, R. Yaa, E. Chepsat, J. M. Njunge, T. Chege, F. Guleid, M. Rosenkranz, C. K. Kariuki, R. Frank, S. M. Kinyanjui, L. M. Murungi, P. Bejon, A. Färnert, K. K. A. Tetteh, J. G. Beeson, D. J. Conway, K. Marsh, J. C. Rayner and F. H. A. Osier
Frontiers in Immunology
KTH Royal Institute of Technology
High-Density Antigen Microarrays for the Assessment of antibody selectivity and off-target binding
R. Sjoberg, E. Andersson, C. Hellstrom, C. Mattsson, J. M. Schwenk, P. Nilsson, and B. Ayoglu
Methods in Molecular Biology
National Cancer Institute
High-resolution crystal structures of the D1 and D2 domains of protein tyrosine phosphatase epsilon for structure-based drug design
G. T. Lountos, S. Raran-Kurussi, B. M. Zhao, B. K. Dyas, T. R. Burke Jr, R. G. Ulrich and D. S. Waugh
Structural Biology
University of Copenhagen
Enzyme Activities at Different Stages of Plant Biomass Decomposition in Three Species of Fungus-Growing Termites
Rafael R. da Costa, Haofu Hu, Bo Pilgaard, Sabine M. E. Vreeburg, Julia Schückel, Kristine S. K. Pedersen, Stjepan K. Kračun, Peter K. Busk, Jesper Harholt, Panagiotis Sapountzis, Lene Lange, Duur K. Aanen, and Michael Poulsena
Applied and Environmental Microbiology
Double blind microarray-based polysaccharide profiling enables parallel identification of uncharacterized polysaccharides and carbohydrate-binding proteins with unknown specificities
Armando A. Salmeán, Alexia Guillouzo, Delphine Duffieux, Murielle Jam, Maria Matard-Mann, Robert Larocque, Henriette L. Pedersen, Gurvan Michel, Mirjam Czjzek, William G. T. Willats and Cécile Hervé
Nature Scientific Reports
The impact of silicon on cell wall composition and enzymatic saccharification of Brachypodium distachyon
S. Głazowska, L. Baldwin, J. Mravec, C. Bukh, T. H. Hansen, M. M. Jensen, J. U. Fangel, W. G. T. Willats, M. Glasius, C. Felby, and J. K. Schjoerring
Biotechnology for Biofuels
United States Army Medical Research Institute of Infectious Diseases (USAMRID)
Human antibody responses to emerging Mayaro virus and cocirculating alphavirus infections examined by using structural proteins from nine new and old world lineages
Jessica L. Smith, Christine L. Pugh, Emily D. Cisney, Sarah L. Keasey, Carolina Guevara, Julia S. Ampuero, Guillermo Comach, Doris Gomez, Margarita Ochoa-Diaz, Robert D. Hontz, Robert G. Ulricha
2017
Cancer Research Institute of Salamanca
Screening and validation of novel biomarkers in osteoarticular pathologies by comprehensive combination of protein array technologies
Álvaro Sierra-Sánchez, Diego Garrido-Martín, Lucía Lourido, María González-González, Paula Díez, Cristina Ruiz-Romero, Ronald Sjöber, Conrad Droste, Javier De Las Rivas, Peter Nilsson, Francisco Blanco and Manuel Fuentes
Journal of Proteome Research
CDI Laboratories
Identification of serological biomarkers for early diagnosis of lung cancer using a protein array-based approach
Jianbo Pan, Guang Song, Dunyan Chen, Yadong Li, Shuang Liu, Shaohui Hu, Christian Rosa, Daniel J. Eichinger, Ignacio Pino, Heng Zhu, Jiang Qian and Yi Huang
Molecular and Cellular Proteomics
Multiplexed biomarker panels discriminate Zika and Dengue virus infection in humans
Guang Song, Hee-Sool Rho, Jianbo Pan, Pedro Ramos, Ki-Jun Yoon, Freddy A. Medina, Emily M. Lee, Daniel Eichinger, Guo-li Ming, Jorge L. Muñoz-Jordan, Hengli Tang, Ignacio Pino, Hongjun Song, Jiang Qian and Heng Zhu
Molecular and Cellular Proteomics
CSIC (Spanish National Research Council)
Deciphering how Cpl-7 cell wall-binding repeats recognize the bacterial peptidoglycan
Noemí Bustamante, Manuel Iglesias-Bexiga, Noelia Bernardo-García, Noella Silva-Martín, Guadalupe García, María A. Campanero-Rhodes, Esther García, Isabel Usón, Rubén M. Buey, Pedro García, Juan A. Hermoso, Marta Bruix and Margarita Menéndez
Nature Scientific Reports
Griffith University
Lectin activity of the pneumococcal pillin proteins
Christopher J. Day, Adrienne W. Paton, Richard M. Harvey, Lauren E. Hartley-Tassell, Kate L. Seib, Joe Tiralongo, Nicolai Bovin, Silvana Savino, Vega Masignani, James C. Paton and Michael P. Jennings
Nature Scientific Reports
KTH Royal Institute of Technology
High-density serum/plasma Reverse Phase Protein Arrays
Cecilia Hellström, Tea Dodig-Crnković, Mun-Gwan Hong, Jochen M Schwenk, Peter Nilsson and Ronald Sjöberg
Serum/Plasma Proteomics
Technical University of Denmark
Surface properties correlate to the digestibility of hydrothermally pretreated lignocellulosic Poaceae biomass feedstocks
Demi T. Djajadi, Aleksander R. Hansen, Anders Jensen, Lisbeth G. Thygesen, Manuel Pinelo, Anne S. MeyerEmail authorView ORCID ID profile and Henning Jørgensen
Biotechnology for Biofuels
University of Brussels
Infrared imaging of high density protein arrays
Joëlle De Meutter, Julie Vandenameele, André Matagneb and Erik Goormaghtigh
Analyst
University of Copenhagen
Click chemistry-based tracking reveals putative cell wall-located auxin binding sites in expanding cells
Jozef Mravec, Stjepan K. Kračun, Elena Zemlyanskaya, Maja G. Rydahl, Xiaoyuan Guo, Martina Pičmanová, Kasper K. Sørensen, Kamil Růžička and William G. T. Willats
Nature Scientific Reports
Genome-wide association mapping in winter barley for grain yield and culm cell wall polymer content using the high-throughput CoMPP technique
Andrea Bellucci, Alessandro Tondelli, Jonatan U. Fangel, Anna Maria Torp, Xin Xu, William Willats, Andrew Flavell, Luigi Cattivelli and Søren K. Rasmussen
PLOS ONE
Insoluble (1 → 3), (1 → 4)-β-D-glucan is a component of cell walls in brown algae (Phaeophyceae) and is masked by alginates in tissues
Armando A. Salmeán, Delphine Duffieux, Jesper Harholt, Fen Qin, Gurvan Michel, Mirjam Czjzek, William Willats and Cécile Hervé
Nature Scientific Reports
Pea border cell maturation and release involve complex cell wall structural dynamics
Jozef Mravec, Xiaoyuan Guo, Aleksander R. Hansen, Julia Schückel, Stjepan Kracun, Maria Mikkelsen, Grégory Mouille, Ida Johansen, Peter Ulvskov, David Domozych, William Willats
Plant Physiology
University of Oxford
Exploring the glycans of Euglena gracilis
Ellis C. O’Neill, Sakonwan Kuhaudomlarp, Martin Rejzek, Jonatan U. Fangel, Kathirvel Alagesan, Daniel Kolarich, William G. T. Willats and Robert A. Field
University of Rome
Three Pectin Methylesterase Inhibitors Protect Cell Wall Integrity for Arabidopsis Immunity to Botrytis
Vincenzo Lionetti, Eleonora Fabri, Monica De Caroli, Aleksander R. Hansen, William G.T. Willats, Gabriella Piro, Daniela Bellincampi
Plant Physiology
2016
GSK Vaccines
Exploring host-pathogen interactions through genome wide protein microarray analysis
Luigi Scietti, Katia Sampieri, Irene Pinzuti, Erika Bartolini, Barbara Benucci, Alessia Liguori, Andreas F. Haag, Paola Lo Surdo, Werner Pansegrau, Vincenzo Nardi-Dei, Laura Santini, Seguinde Arora, Xavier Leber, Simonetta Rindi, Silvana Savino, Paolo Costantino, Domenico Maione, Marcello Merola, Pietro Speziale, Matthew J. Bottomley, Fabio Bagnoli, Vega Masignani, Mariagrazia Pizza, Meike Scharenberg, Jean-Marc Schlaeppi, Mikkel Nissum and Sabrina Liberatori
Nature Scientific Reports
Institute of Physical Chemistry Roscalano
Combined bacteria microarray and quartz crystal microbalance approach for exploring glycosignatures of nontypeable Haemophilus influenzae and recognition by host lectins
Ioanna Kalograiaki, Begoña Euba, Davide Proverbio, María A. Campanero-Rhodes, Teodor Aastrup, Junkal Garmendia and Dolores Solís
Analytical Chemistry
KTH Royal Institute of Technology
Massive and parallel expression profiling using microarrayed single-cell sequencing
Sanja Vickovic, Patrik L. Ståhl, Fredrik Salmén, Sarantis Giatrellis, Jakub Orzechowski Westholm, Annelie Mollbrink, José Fernández Navarro, Joaquin Custodio, Magda Bienko, Lesley-Ann Sutton, Richard Rosenquist, Jonas Frisén and Joakim Lundeberg
Nature Communications
Exploration of high-density protein microarrays for antibody validation and autoimmunity profiling
Ronald Sjöberg, Cecilia Mattsson, Eni Andersson, Cecilia Hellström, Mathias Uhlen, Jochen M. Schwenk, Burcu Ayoglu and Peter Nilsson
New Biotechnology
Monash University
New monoclonal antibodies to defined cell surface proteins on human pluripotent stem cells
Carmel M. O'Brien, Hun S. Chy, Qi Zhou, Shiri Blumenfeld, Jack W. Lambshead, Xiaodong Liu, Joshua Kie, Bianca D. Capaldo, Tung-Liang Chung, Timothy E. Adams, Tram Phan, John D. Bentley, William J. McKinstry, Karen Oliva, Paul J. McMurrick, Yu-Chieh Wang, Fernando J. Rossello, Geoffrey J. Lindeman, Di Chen, Thierry Jarde, Amander T. Clark, Helen E. Abud, Jane E. Visvader, Christian M. Nefzger, Jose M. Polo, Jeanne F. Loring, Andrew L. Laslett
Stem Cells
Scylla Biotech Srl
Phage display revisited: Epitope mapping of a monoclonal antibody directed against Neisseria meningitidis adhesin A using the PROFILER technology
Veronica Lanza Cariccio, Maria Domina, Salvatore Benfatto, Mario Venza, Isabella Venza, Agnese Faleri, Marco Bruttini, Erika Bartolini, Marzia Monica Giuliani, Laura Santini, Brunella Brunelli, Nathalie Norais, Erica Borgogni, Angelina Midiri, Roberta Galbo, Letizia Romeo, Carmelo Biondo, Vega Masignani, Giuseppe Teti, Franco Felici and Concetta Beninati
mAbs
Universidade de Lisboa
Complexity of the Ruminococcus flavefaciens cellulosome reflects an expansion in glycan recognition
Immacolata Vendittoa, Ana S. Luisa, Maja Rydahlc, Julia Schückelc, Vânia O. Fernandesa, Silvia Vidal-Melgosac, Pedro Bulea, Arun Goyale, Virginia M. R. Piresa, Catarina G. Douradoa, Luís M. A. Ferreiraa, Pedro M. Coutinhof, Bernard Henrissatf, J. Paul Knoxi, Arnaud Basléb, Shabir Najmudina, Harry J. Gilbertb, William G. T. Willats, and Carlos M. G. A. Fontesa
PNAS
University of Brussels
Analysis of protein microarrays by FTIR imaging
J. De Muetter, K-M. Derfoufi and E. Goormaghtigh
Biomedical Spectroscopy and Imaging
University of Copenhagen
High throughput screening of starch structures using carbohydrate microarrays
Vanja Tanackovic, Maja Gro Rydahl, Henriette Lodberg Pedersen, Mohammed Saddik Motawia, Shahnoor Sultana Shaik, Maria Dalgaard Mikkelsen, Susanne Langgaard Krunic, Jonatan Ulrik Fangel, William George Tycho Willats and Andreas Blennow
Nature Scientific Reports
University of Messina
Epitope mapping of a monoclonal antibody directed against Neisserial heparin binding antigen using next generation sequencing of antigen-specific libraries
Maria Domina, Veronica Lanza Cariccio, Salvatore Benfatto, Mario Venza, Isabella Venza, Danilo Donnarumma, Erika Bartolini, Erica Borgogni, Marco Bruttini, Laura Santini, Angelina Midiri, Roberta Galbo, Letizia Romeo, Francesco Patanè, Carmelo Biondo, Nathalie Norais, Vega Masignani, Giuseppe Teti , Franco Felici, Concetta Beninati
PLOS ONE
Oxford University
2015
Ghent University
Antibody-based screening of cell wall matrix glycans in ferns reveals taxon, tissue and cell-type specific distribution patterns
Olivier Leroux, Iben Sørensen, Susan E. Marcus, Ronnie L.L. Viane, William G.T. Willats and J. Paul Knox
BMC Plant Biology
KTH Royal Institute of Technology
Affinity proteomics discovers decreased levels of AMFR in plasma from Osteoporosis patients
Ulrika Qundos, Kimi Drobin, Cecilia Mattsson, Mun-Gwan Hong, Ronald Sjöberg, Björn Forsström, David Solomon, Mathias Uhlén, Peter Nilsson, Karl Michaëlsson, Jochen M. Schwenk
PROTEOMICS: Clinical Applications
Lawrence Berkeley National Laboratory
Structural characterization of a mixed-linkage glucan deficient mutant reveals alteration in cellulose microfibril orientation in rice coleoptile mesophyll cell walls
Andreia M. Smith-Moritz, Zhao Hao, Susana G. Fernández-Niño, Jonatan U. Fangel, Yves Verhertbruggen, Hoi-Ying N. Holman, William G.T. Willats, Pamela C. Ronald, Henrik V. Scheller, Joshua L. Heazlewood and Miguel E. Vega-Sánchez
Frontiers in Plant Science
Norwegian University of Life Sciences
Resistant starch diet induces change in the swine microbiome and a predominance of beneficial bacterial populations
Özgün C.O. Umu, Jeremy A. Frank, Jonatan U. Fangel, Marije Oostindjer, Carol Souza da Silva, Elizabeth J. Bolhuis, Guido Bosch, William G.T. Willats, Phillip B. Pope and Dzung B. Diep
Microbiome
Wellcome Trust, Sanger Institute
A human platelet receptor protein microarray identifies the high affinity immunoglobulin E receptor subunit (FcR1) as an activating platelet endothelium aggregation receptor 1 (PEAR1) ligand
Yi Sun, Christophe Vandenbriele, Alexandre Kauskot, Peter Verhamme, Marc F. Hoylaerts and Gavin J. Wright
Molecular and Cellular Proteomics
United States Army Medical Research Institute of Infectious Diseases (USAMRID)
Serum biomarkers of Burkholderia mallei infection elucidated by proteomic imaging of skin and lung abscesses
Trevor G. Glaros, Candace D. Blancett, Todd M. Bell, Mohan Natesan and Robert G. Ulrich
Clinical Proteomics
University of Bern
Novel in vitro diagnosis of equine allergies using a protein array and mathematical modelling approach: a proof of concept using insect bite hypersensitivity
E. Marti, X. Wang, N.N. Jambari, C. Rhyner, J. Olzhausen, J.J. Pérez-Barea, G.P. Figueredo and M.J.C.Alcocer
Veterinary Immunology and Immunopathology
University of Copenhagen
A new versatile microarray-based method for high throughput screening of carbohydrate-active enzymes
Silvia Vidal-Melgosa, Henriette L. Pedersen, Julia Schückel, Grégory Arnal, Claire Dumon, Daniel B. Amby, Rune Nygaard Monrad, Bjørge Westereng and William G.T. Willats
Journal of Biological Chemistry
2014
KTH Royal Institute of Technology
Proteome-wide epitope mapping of antibodies using ultra-dense peptide arrays
Björn Forsström, Barbara Bisławska Axnäs, Klaus-Peter Stengele, Jochen Bühler, Thomas J. Albert, Todd A. Richmond, Francis Jingxin Hu, Peter Nilsson, Elton P. Hudson, Johan Rockberg and Mathias Uhlen
Molecular and Cellular Proteomics
Norwegian University of Life Sciences (NMBU)
Discovery of LPMO activity on hemicelluloses shows the importance of oxidative processes in plant cell wall degradation
Jane W. Agger, Trine Isaksen, Anikó Várnai, Silvia Vidal-Melgosa, William G.T. Willats, Roland Ludwig, Svein J. Horn, Vincent G.H. Eijsink, and Bjørge Westereng
PNAS
United States Army Medical Research Institute of Infectious Diseases (USAMRID)
Determination of specific antibody responses to the six species of Ebola and Marburg viruses by multiplexed protein microarrays
Teddy Kamata, Mohan Natesan, Kelly Warfield, M. Javad Aman and Robert G. Ulrich
Clinical and Vaccine Immunology
2013
KTH Royal Institute of Technology
Autoantibody profiling in multiple sclerosis using arrays of human protein fragments
Burcu Ayoglu, Anna Haggmark, Mohsen Khademi, Tomas Olsson, Mathias Uhlen, Jochen M. Schwenk and Peter Nilsson
Molecular and Cellular Proteomics
Medical Research Council Toxicology Unit
Decreased translation of Dio3 mRNA is associated with drug-induced hepatotoxicity
Kate M. Dudek, Laura Suter, Veerle M. Darras, Emma L. Marczylo and Timothy W. Gant
Biochemical Journal
Monash University
Design and operation of an automated high-throughput monoclonal antibody facility
Daniel Layton, Caroline Laverty and Edouard C. Nice
Biophysical Reviews
University of North Carolina
Genomic and physiological responses to strong selective pressure during late organogenesis: few gene expression changes found despite striking morphological differences
Goran Bozinovic, Tim L Sit, Richard Di Giulio, Lauren F Wills and Marjorie F Oleksiak
BMC Genomics
United States Army Medical Research Institute of Infectious Diseases (USAMRID)
Analysis of protein tyrosine phosphatase interactions with microarrayed phosphopeptide substrates using imaging mass spectrometry
Christopher J. McKee, Harry B. Hines, and Robert G. Ulrich
Analytical Biochemistry
2012
KTH Royal Institute of Technology
Validation of affinity reagents using antigen microarrays
Ronald Sjöberg, Mårten Sundberg, Anna Gundberg, Åsa Sivertsson, Jochen M. Schwenk, Mathias Uhlén and Peter Nilsson
New Biotechnology
Moredun Research Institute
Development of a cDNA microarray for the measurement of gene expression in the sheep scab mite Psoroptes ovis
Stewart TG Burgess, Alison Downing, Craig A Watkins, Edward J Marr, Alasdair J Nisbet, Fiona Kenyon, Carol McNair and John F Huntley
Parasites and Vectors
United States Army Medical Research Institute of Infectious Diseases (USAMRID)
Therapeutic inhibition of pro-inflammatory signaling and toxicity to Staphylococcal enterotoxin B by a synthetic dimeric BB-Loop mimetic of MyD88
Teri L. Kissner, Gordon Ruthel, Shahabuddin Alam, Enrique Mann, Dariush Ajami, Mitra Rebek, Eileen Larkin, Stefan Fernandez, Robert G. Ulrich, Sun Ping, David S. Waugh, Julius Rebek Jr and Kamal U. Saikh
PLOS ONE
University of Copenhagen
Versatile high resolution oligosaccharide microarrays for plant glycobiology and cell wall research
Henriette L. Pedersen, Jonatan U. Fangel, Barry McCleary, Christian Ruzanski, Maja G. Rydahl, Marie-Christine Ralet, Vladimir Farkas, Laura von Schantz, Susan E. Marcus, Mathias C.F. Andersen, Rob Field, Mats Ohlin, J. Paul Knox, Mads H. Clausen and William G.T. Willats
Journal of Biological Chemistry
University of Miami
The effect of short-term hypoxic exposure on metabolic gene expression
Meredith V. Everett, Corina E. Antal and Douglas L. Crawford
Journal of Experimental Zoology Part A: Ecological and Integrative Physiology
2011
European Molecular Biology Laboratory
High-throughput hybridoma screening
Alan Sawyer and Duncan Hall
Genetic Engineering and Biotechnology News
KTH Royal Institute of Technology
A lateral flow protein microarray for rapid and sensitive antibody assays
Jesper Gantelius, Tarek Bass, Ronald Sjöberg, Peter Nilsson and Helene Andersson-Svahn
International Journal of Molecular Sciences
A ten-minute high density lateral flow protein microarray assay
Jesper Gantelius, Tarek Bass, Anna Gundberg and Marten Sundberg
15th International Conference on Miniaturized Systems for Chemistry and Life Sciences 2011
Novartis
The Streptococcus pneumoniae pilus-1 displays a biphasic expression pattern
Gabriella De Angelis , Monica Moschioni , Alessandro Muzzi, Alfredo Pezzicoli, Stefano Censini, Isabel Delany, Morena Lo Sapio, Antonia Sinisi, Claudio Donati, Vega Masignani and Michèle A. Barocchi
PLOS ONE
University of Miami
Transcriptomic assessment of resistance to effects of an aryl hydrocarbon receptor (AHR) agonist in embryos of Atlantic killifish (Fundulus heteroclitus) from a marine Superfund site
Marjorie F Oleksiak, Sibel I Karchner, Matthew J Jenny, Diana G Franks, David B Mark Welch and Mark E Hahn
BMC Genomics
Samuel Lunenfeld Research Institute
A roadmap to generate renewable protein binders to the human proteome
Karen Colwill and Susan Graslund
Nature Methods
University of Edinburgh
Temporal profiling of the coding and non-coding murine cytomegalovirus transcriptomes
Paul Lacaze, Thorsten Forster, Alan Ross, Lorraine E. Kerr, Eliane Salvo-Chirnside, Vanda Juranic Lisnic, Guillermo H. López-Campos, José J. García-Ramírez, Martin Messerle, Joanne Trgovcich, Ana Angulo and Peter Ghazal
Journal of Virology
University of North Carolina
Gene expression throughout a vertebrate's embryogenesis
Goran Bozinovic, Tim L Sit, David E Hinton and Marjorie F Oleksiak
BMC Genomics
2010
Cornell University
Nanoscale resolution, multi-component biomolecular arrays generated by aligned printing with parylene peel-off
Christine P. Tan, Benjamin R. Cipriany, David M. Lin and Harold G. Craighead
Nano Letters
German Cancer Research Centre (DKFZ)
Increasing the sensitivity of reverse phase protein arrays by antibody-mediated signal amplification
Jan C Brase, Heiko Mannsperger, Holger Fröhlich, Stephan Gade, Christian Schmidt, Stefan Wiemann, Tim Beissbarth, Thorsten Schlomm, Holger Sültmann and Ulrike Korf
Proteome Science
Glasgow Southern General Hospital
Assessment of transcriptomal analysis of varicella-zoster-virus gene expression in patients with and without post-herpetic neuralgia
G.H. Ashrafi, Esther Grinfeld, Paul Montague, Thorsten Forster, Alan Ross, Peter Ghazal, Fiona Scott, Judith Breuer, Roslyn Goodwin and Peter G.E. Kennedy
Virus Genes
United States Army Medical Research Institute of Infectious Diseases (USAMRID)
Inhibition of toxic shock by human monoclonal antibodies against Staphylococcal enterotoxin B
Eileen A. Larkin, Bradley G. Stiles and Robert G. Ulrich
PLOS ONE
Protein microarrays and biomarkers of infectious disease
Mohan Natesan and Robert G. Ulrich
International Journal of Molecular Sciences
University of Aberdeen
Transcriptomic response of red grouse to gastrointestinal nematode parasites and testosterone: implications for population dynamics
L.M.I. Webster, S. Paterson, F. Mougeot, J. Martinez-Padilla and S.B. Piertney
Molecular Ecology
University of Exeter
Quantitative label-free screening for antibodies using scattering biophotonic microarray imaging
Olkhov and Shaw
Analytical Biochemistry
University of North Carolina
Embryonic gene expression among pollutant resistant and sensitive Fundulus heteroclitus populations
Bozinovic and Oleksiak
Aquatic Toxicology
2009 and earlier
Glasgow Southern General Hospital
Genome-wide reduction in transcriptomal profiles of varicella-zoster virus vaccine strains compared with Parental Oka strain using long oligonucleotide microarrays
Esther Grinfeld, Alan Ross, Thorsten Forster, Peter Ghazal and Peter G.E.Kennedy
Virus Genes
University of Copenhagen
An array of possibilities for pectin
Iben Sørensen, Henriette Lodberg Pedersen and William G.T. Willats
Carbohydrate Research
University of Exeter
Whole serum BSA antibody screening using a label-free biophotonic nanoparticle array
Rouslan V.Olkhov, Jeremy D.Fowke and Andrew M.Shaw
Analytical Biochemistry
Label-free antibody–antigen binding detection by optical sensor array based on surface-synthesized gold nanoparticles
Olkhov and Shaw
Biosensors and Bioelectronics
University of Liverpool
Microarray analysis of gender- and parasite-specific gene transcription in Strongyloides ratti
Helen Evans, Luciane V. Mello, Yongxiang Fang, Ernst Wit, Fiona J. Thompson, Mark E. Viney and Steve Paterson
International Journal for Parisitology
Genomic resources and microarrays for the common carp Cyprinus carpio L.
D.R. Williams, W. Li, M.A. Hughes, S.F. Gonzalez, C. Vernon, M.C. Vidal, Z. Jeney, G. Jeney, P. Dixon, B. McAndrew, R. Bartfai, L. Orban, V. Trudeau, J. Rogers, L. Matthews, E.J. Fraser, A.Y. Gracey, A.R. Cossins
Journal of Fish Biology
University of Stirling
A description of the origins, design and performance of the TRAITS–SGP Atlantic salmon Salmo salar L. cDNA microarray
J.B Taggart, J.E Bron, S.A.M Martin, P.J Seear, B. Høyheim, R. Talbot, S.N. Carmichael, L.A.N Villeneuve, G.E. Sweeney, D.F. Houlihan, C.J. Secombes, D.R. Tocher and A.J. Teale
Journal of Fish Biology